Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0007900

Sequence Length

305 nt

GC Content

0.3869

GUGGGUCUUCAAACAACUCUAUGAUAAAGGCCUUGUUUAUAGAGGUGUGAAAGUCAUGCCCUUCUCUACGGCAUGUAACACUCCACUUUCCAACUUCGAGUCACACCAGAAUUAUAAGAGAAGAAUUGAUUGACAAGAAAACAGAGAGUGCAGUAUCUCAGAUGCAGUCUGUGAUUGAACUUGGAAGAGUGAUCAGAGACCGAAAAACUAUUCCCAUAAAGUAUCCUUUGAAAGAAAUUGUGGUUAUCCAUCAAGAUCCAGAAGCUCUUAAAGAUAUCAAGUCUUUGGAGAAGUAUAUCAUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.90 kcal/mol

Ensemble Metrics

Free Energy: -69.61

Frequency: 0.0000

Diversity: 97.03

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((.......((((((((..((....))..))))))))((((......((((((.........))))))..))))..(((((((....(((..((((...........................))))..)))....)))))))..(((((...))))).((((.(((((..((((....))))))))).))))..........(((...(((((....)))))...)))...((((....)))).)))))))).....)(((((.(((((....(((....)))...))))).)))))

Thermodynamic Ensemble Prediction

(((((((((...,{,.((((((((,,(,....))..)))))))),|||......((((((.........))))))..,}}},.((((((({{{.(((,,((((,.......{{............,}}.,)}}}..,,,....,|||,||{{,,,,,...,,)))},|||,|||||}}|,||}},,))))),||||||}}.,,.......||,...,{,{|..,.}}}}}...},..,,|{((....)))},}}}})))}....{|(((((,((({{...,|||,,,})),...,}))).)))))