Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0008600

Sequence Length

406 nt

GC Content

0.4433

AAAUAGAAUUUCUCUACAAUGAGAACACGGUUAGAGAAAGCCCCAACAUUACAGACCGGUGGAUCCUGUCCUUCAUGCAGUCUCUCAUUGGCUUCUUUGAGACUGAAAUGGCAGCUUAUAGGCUUUAUACUGUGGUGCCUCGCCUGGUCAAGUUUGUAGAUAUUCUGACCAAUUGGUAUGUUAGAAUGAACCGCAGAAGAUUAAAGGGUGAAAAUGGGAUGGAGGAUUGUGUCAUGGCCCUAGAAACCUUGUUUAGUGUUCUGCUUUCUCUUUGCAGACUUAUGGCUCCCUACACACCUUUUCUCACUGAAUUGAUGUACCAGAAUCUAAAGGUGCUGAUUGACCCUGUUUCUGUUCAGGACAAGGACACACUCAGCAUUCACUACCUCAUGCUGCCCCGUGUUCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-101.60 kcal/mol

Ensemble Metrics

Free Energy: -110.00

Frequency: 0.0000

Diversity: 106.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((.....))))......((((((((...........................((((..(((((((((.....(((((((..............)))))))....(((.((((((((........)))))).))...))).((((((((((((((((((((((((..........)))))))))....((((((.((((((((((......(((...((........))....))).....))))..)))))).))))))......))))))))))..)))))......(((.(..(((.....)))..).)))..(((((.(....(((........)))..).)))))...))))).))))..))))((((((..........))))))..)))))))).

Thermodynamic Ensemble Prediction

.,.((((.....))))...,..((((((((,,.,,{..,,,,...........{{{.(({(,,{||,||||,..,..(((((((.....,....,...)))))))....(((({(..{{((,,,,,,..}|}||||||,,,|||.|{{|(((((((((((,((((((((..........))))))))|,...((((((.((((((((((......(((...((.,....,.))....))).....)))),.}))))).))))))......))))))))))}.,))),......,,{,{,,({{.....}}}..},.)}},))|,...,))))|||{||{.{|.,{,{{,||||,...)))))},)),..}},)||||||......,,,.}})))),,)))))))).