Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0013800

Sequence Length

215 nt

GC Content

0.4884

GAGGACUAUCGGGUCUGUAUGGACUUUAACAUUAUUCGGAAAGACUCACUCCCUGUUUGCCCUGUGGAUGCUUCAGGCUGCUUCACAACGGAGGUGACAGAUUUCGCAGGACAGUAUGUGAAGGAUGCUGACAAAAGUAUCAUCAGGACUUUGAAGGAACAAGGCCGACUUCUGGUUGCCACCACCUUCACUCACAGCUACCCUUUUUGCUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.70 kcal/mol

Ensemble Metrics

Free Energy: -58.80

Frequency: 0.0013

Diversity: 57.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((......((((((...((((...........))))...))))))....)))......((((..((((((((((..(.(((((((((....((((......))))......)).))))))).)..))))....))))))..))))....((((((.....(((.((((...)))))))....))))))(((.((((..........)))))))

Thermodynamic Ensemble Prediction

((({......((((((...((((...........))))...))))))....,{{{,,.{,(((({,((,(({,,,,..,,|{||{|{||}}.}||||,}}..,||||{.....},.))))))){|{{||,,....))))))..}}}}.,..((((((.....(({{((({...)))))))....)))))}(((.((((..........)))))))