Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0014200

Sequence Length

241 nt

GC Content

0.4481

AUGUUGCCAGAGGACGAUUACUCAUUUUAAUGGAAGCCAGAUUGUCAGCCCUCUAUAAAUUGGAGAGUGACUAUGAGAUCCUUGAAAGAUUUCCUGGUGCCUAUCUUAAAGGCAAGAAGUACAGGCCCCUGUUUGACUAUUUCCUGAAGGAUGCUGACAAAAGUAUCAUCAGGACUUUGAAGGAACAAGGCCGACUUCUGGUUGCCACCACCUUCACUCACAGCUACCCUUUUUGCUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-66.10 kcal/mol

Ensemble Metrics

Free Energy: -70.10

Frequency: 0.0015

Diversity: 42.98

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((..(...(((........))).......(((.(((((((..(((.((.(((((.....))))).)).((((.((((((.......)))))).))))((((.......))))..........((((..(((((.......((((((..((((((......)))))).))))))........))))).))))))).))))))).)))....)..))(((.((((..........)))))))

Thermodynamic Ensemble Prediction

.{{.,({{.(((........)))..,,,,{(((..(((((,..((({,(.(((((.....))))).))))).,.((((((.......))))))))))),,||},...,,})))}{(((((.{.((((..(((((.......((((((..((((((......)))))).))))))........))))).))))}))))))|||,,}},,,..,..)}(((.((((..........)))))))