Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IGSF11_0003400

Sequence Length

250 nt

GC Content

0.4000

AUGAAUGGAUAAAGAAAAUGCAGGACAUAUGGUGGGAGGAGCCAAGAUGGCCGAAUAGGAACAGCUCCGGUCUACAGCUCCCAGUGUGAGCGACACAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCAUCCAGGACAUGUACUCUCAACUGGCGGUUGGGAAGAAGACAGAAAGAGAUAGACAUGUGGGUCGAAGUCUUUACUGGGGUCCGUCGUGUUACCCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.10 kcal/mol

Ensemble Metrics

Free Energy: -47.21

Frequency: 0.0013

Diversity: 54.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.((........(((.((((((((...((((((((......(((((...((......)).)))))....)))))..((((.....))))..........................................................)))....)))))..((((((((...)))))))).((...((((((((....(((......)))....))))).)))...)).))).))))).))).

Thermodynamic Ensemble Prediction

,,,..(((,(,.......,{{{.{{(.,.,,{((((,(((((.....,({(({...,|}.....)),)}})),.,.}))))|,((((.....})))......................................................{((......}}).,,,..((((((((...)))))))).,....((((((((....(((......)))....))))).)))..)))))))}),},,.}}}.