Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IPCEF1_0000100

Sequence Length

250 nt

GC Content

0.2840

GCAGAGAAAGCUGAUGGAUUUGUCAACCUGCCUGAUUUCACUGUGGAAAGAGCAUCUGAAUGCAAGAAAAAGCAUGCUUUUAAGAUCAGCCAUCCACAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCAAAUUCUAAUUUUCAUUUUAAGUUUACUUCCAGAGUACAAAUGUAAAUAACAAGAGUGCAAGUAAAUUAUUGAUGCUGGAGUUUCAAAUAAGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.90 kcal/mol

Ensemble Metrics

Free Energy: -37.86

Frequency: 0.0003

Diversity: 33.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((.(((.((...)).))).))..)((.(((.((((..(((((((..(.(((((((((.(((.(......).))).))).))))..))).)))))))........................................................((((((((.....((((...(((((((((.....((((...(((.....)))...)))))))))))))...)))).)))))))).)))).)))))

Thermodynamic Ensemble Prediction

(,,({.{{,.{{,,.,,.,}),))..)||,|((..{,,..(((((((..(.(((((({((.(((.{......).))).))).})))..}),.)))))))......................................................,.((((((((....{((,{...(((((((((.....((((...(((.....)))...)))))))))))))..,)),}.)))))))),.,,..}}}))