Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IPCEF1_0001000

Sequence Length

250 nt

GC Content

0.3400

GUGGUUAAAUAAACUUGGAUCGGCUGUAAUCCAUCAGGAAUCCACUACAAAGGAUGAAGAAUGUUACAGUGAAAGUGAACAGGAAGAUCCAGAAAUAGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGUGUAGCCCAAGACAGUUCUUCUUCUUCUUCUAAUGUGGCCGAGGGAAGCCAAAAGAUUGGACACCCCCGGAUUAAAAGUUGACUGUUGAGGAAUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.95 kcal/mol

Ensemble Metrics

Free Energy: -42.87

Frequency: 0.0017

Diversity: 39.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((..........(((((((..((((..(((....)))((((........))))........((((.......))))))))...))))))).....(((.......................................................))))))...(((((((((..(.((..((.......(((.(((...((((....))))...))).)))......))..))..)..)))))))))..

Thermodynamic Ensemble Prediction

.,(((({.{{,..,{({{{((.,(((({,{,{.,,.,,,((((........)))).......}||||}}}...,}),,,},|,..}})))}|......,,..................................................,}}.)))))},...(((((((((..(.((..((....,,,(((.(((...((({....})))...})),))).,,,..))..))..)..)))))))))..