Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IPCEF1_0001100

Sequence Length

250 nt

GC Content

0.3280

ACUGCACAGCAGGCAUCUUCAUCCUCACCCAGCCUGAGUGGAACGUCGUAUUCUUUCUCUUCCCUGGAAAAUACAGUGAAGACACCCAGCAGUUUUCCUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCACUUCUACUUAAUGAAUGAAGAAACCUUACUCUGGAUGCUGAAAAGCUGCAUGUCAGCAAAUAAGACGAAUACCCAAUUUAUACAAAUAAAUUAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.10 kcal/mol

Ensemble Metrics

Free Energy: -34.65

Frequency: 0.0160

Diversity: 48.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((..(((((.................))))).))).)..))(((((((....(((((.(((.......))).)))))....(((((....(((....................................................(((.(((........))))))(((........)))))))))))....((((.....)))).........))))))..(((((((....)))))))....)

Thermodynamic Ensemble Prediction

(({.(((..(((((.................))))).))).}..))(((((((..,.(((((.(((.......))).))))}....{{({({{,,{|,....................................................,{{.(((........)))))){(,...|,..,}}})),|||||,...||||,...|))))......}}.))))))..(((((((....)))))))....)