Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ITCH_0002600

Sequence Length

156 nt

GC Content

0.3782

GUGAGAGAAGUUGAGAGUAGUAUUGUGAAGGAAAACAUGAGGACAAGACAGAUCACUUUAAAAGGUCAGGAGAGAAGGAAGACUACUGGGUAAGAAAAAAAAAGUAGAACAUAAAGUUAAGCAGUAAGAGAAUAGGGAGUGAAUGAAGUUGAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-6.70 kcal/mol

Ensemble Metrics

Free Energy: -9.80

Frequency: 0.0065

Diversity: 32.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.......((.(.(((...))).).))......)))..(..(((..((..(((((((......((...............(((((...............)))))(((.....))).........))......))))))).))...)))..)..

Thermodynamic Ensemble Prediction

(((.......((.{.{{{...,}|.|.},......)))..{..({{..|...(((((((....,.((,,.............||,|||..,............||..{((.....)))..,).............})))))).},...)))..)..