Sequence Details

BLAST PRIMER
Symbol
hsa_ITCH_0011100
Sequence Length
340 nt
GC Content
0.4088
UUGAAGAAGUAGUUGUGACUUUGCAGCUUGGAGGUGACAAAGAGCCAACAGAGACAAUAGGAGACUUGUCAAUUUGUCUUGAUGGGCUACAGUUAGAGUCUGAAGUUGUUACCAAUGGUGAAACUACAUGUUCAGAAAGUCCUUUUAUGUGGAAUGCAAGAGAUUGAUUUGAAUGACUGGCAAAGACAUGCCAUCUACCGUCAUUAUGCAAGGACCAGCAAACAAAUCAUGUGGUUUUGGCAGUUUGUUAAAGAAAUUGAUAAUGAGAAGAGAAUGAGACUUCUGCAGUUUGUUACUGGAACCUGCCGAUUGCCAGUAGGAGGAUUUGCUGAUCUCAUGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-83.50 kcal/mol
Ensemble Metrics
Free Energy: -89.32
Frequency: 0.0001
Diversity: 90.41
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((((.......))))).)))((..((((((((....((((....(((((((...((......))...)))))))....))))...)))....((((((..(((((((...)))).....)))..))))))..((((((.(((((.((((.(((....))))))).)((((((((((......)))))......))))))))).))))))(((((((....((...((((.(((((((.(((((((.....)))))))..(((((.........))))).((((.....))))....)))))))..))))....))...))))))))))))..))
Thermodynamic Ensemble Prediction
(((..(((((.......))))).)))((..((((((((....((((....(((((((...((......))...)))))))....))))...}}}....{|{{{({{({(((((...))))}}}}},)}..}||||}.,((((((,(((,,,,,{{,{{{....}}|,|}},{{{(({(((((......)))))......)))))),}|,}}}}}}(((((({....{{...((((.(((((((.{{{({,{{..{{|||||,...(((((.........))))).||||},.}},}},.)),)))))))..)))).,,,)).,.))))))))))))..))
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