Sequence Details

BLAST PRIMER
Symbol
hsa_ITCH_0028700
Sequence Length
236 nt
GC Content
0.3559
GGAAGGAUAACUACUGCUUGCAGAUAAACCCCGCUUCUUACAUCAAUCCAGAUCACCUGAAAUAUUUUCGUUUUAUUGGCAGAUUUAUUGCCAUGGGAAAACAAUAUUGAGGAAUGUGAUUUGGAAAUGUACUUCUCCGUUGACAAAGAAAUUCUAGGUGAAAUUAAGAGUCAUGAUCUGAAACCUAAUGGUGGCAAUAUUCUUGUAACAGAAGAAAAUAAAGAGGAAUACAUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-41.80 kcal/mol
Ensemble Metrics
Free Energy: -46.91
Frequency: 0.0003
Diversity: 58.02
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((........(((....)))..........)))))(.......((((((((((((..((((((...(((((..((((((.....))))))....)))))))))))..))...)))))))))).(((((.((((((((.(((....((.(((.....))).))....))))))...((..(((....)))..))...(((((.......)))))......))))).)))))..)
Thermodynamic Ensemble Prediction
(((((........{{{,,,.)}}.,.....,,.|||}|(,,,,...((((((((((((..((((((....((((,.((((({.....}))))),}})),,,.))))))..))...)))))))))).|||||.(((({,{{({((..,,{,.{((,....})).,,....))}}|,...{(..(((....)))..)}...{((((.,...,.))))}.....,))))}.}}})),.}
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