Sequence Details

BLAST PRIMER
Symbol
hsa_ITCH_0029900
Sequence Length
419 nt
GC Content
0.4033
GUUUUUUCAUAUUUGUUUGCCAGAAUGGUAGCUGAGUGGAGGUUGUCUCGAGGUGUUGAAGAACAGACACAAGCUUUCUUUGAAGGCUUUAAUGAAAUUCUUCCCCAGCAAUAUUUGCAAUACUUUGAUGCAAAGGAAUUAGAGGUCCUUUUAUGUGGAAUGCAAGAGAUUGAUUUGAAUGACUGGCAAAGACAUGCCAUCUACCGUCAUUAUGCAAGGACCAGCAAACAAAUCAUGUGGUUUUGGCAGUUUGUUAAAGAAAUUGAUAAUGAGAAGAGAAUGAGACUUCUGCAGUUUGUUACUGGAACCUGCCGAUUGCCAGUAGGAGGAUUUGCUGAUCUCAUGGGGAGCAAUGGACCACAGAAAUUCUGCAUUGAAAAAGUUGGGAAAGAAAAUUGGCUACCCAGAAGUCAUACCUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-98.60 kcal/mol
Ensemble Metrics
Free Energy: -107.54
Frequency: 0.0000
Diversity: 122.50
Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....((....))...))(((...(((((((((.(.(((.....))).).(((((........)))))((((((((...))))))))........(((((.((((((((...)))).....(((((((((...(((((.(.(((((.....(((....(.((.(((((.......(((((((((((......)))))......))))))..........(((((((....((...((((.(((((((.(((((((.....)))))))..(((((.........))))).((((.....))))....)))))))..))))....))...)))))))))))).)).)..)))..))))).)...)))))))))))))).....)))).)))))..)))))))))............)))
Thermodynamic Ensemble Prediction
((.....((....}}...))(((..,(((((((({,{,((({...|))).|.(((((........)))))((((((((...))))))))........{((((.((((((,....||||,...,{(({({|||,.,{{|{|.|.{((((,,...{{{,,,.{.((,{{{{|||.,,,.(((((((((((......)))))......)))))).,,},,,,,.(((((({....((...((((.(((((((.{{{({,{{..{{|||||,...(((((.........))))).||||},.}},}},.)),)))))))..))))....))...))))))),))}}.|}.},,}}}.,}}}}}.}|..,,)))))))}))},...)))))).})))}..}}))))))),,.....,....)))
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