Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_KIAA1244_0001000

Sequence Length

250 nt

GC Content

0.4800

GGAGAAAUGCCUGCUGCCUCUCCAGUUGGCUUUGGAAUCCAAGAAUGUGAAGCUGGCCCAACAUGCUUUGGCAGGGAUGCAGAAGCUUCUGUCGGAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGGCCCCGAGCUGCUGCGACAGGACAAGAGGCCCCGCUCAGGCUCCACCGGGAGCUCCCUCAGUGUCUCGGUGAGAGACGCAGAAGCACAGAUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-59.90 kcal/mol

Ensemble Metrics

Free Energy: -63.79

Frequency: 0.0018

Diversity: 67.77

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((...((((((.((((((((.((((((((((.(.((...)).).))))))))))((.(((.(((((.(((....))).)))))...))).)).......................................................(((((((.....))..)))))...)))...)))))...))..))))))..)(.((((((...((.(((((((.....))))))).))))).....))).)

Thermodynamic Ensemble Prediction

(,.{,...((((((.((((((((.((((((((((,,.{{,..},.}.}})}}))))}{{.{{{.(((({.(((....))).})))),,,|}}.}}.......................................................{(((({{.....,},,)}}))...}},..,)))))...}}.,}))|||,.}{.||||||.,,((.(((((((.....))))))).)},),..,,.}}).)