Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_KLHL1_0000900

Sequence Length

250 nt

GC Content

0.3320

GCUGCUUGGAAUUAAAAGAGGACACCAUUGAGAACCUUCUUGCUGCAGCGUGCCUUCUUCAGCUUCCACAGGUGGUGGAAGUGUGCUGCCACUUCCUCAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGUAGUAAAUUGAAUUAGAAGCCUACUGAAGAAUAUGAUGUCAGAAUUAAUUAAGACAAAAUACUGAGAAAACGAAAGGAAAGAACAAGCUCUCAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.62 kcal/mol

Ensemble Metrics

Free Energy: -39.78

Frequency: 0.0012

Diversity: 50.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((((...........))).)))(.((((((.(.(((((.((....(((...(((((((((((((((.....)))))))..(((((((..............................................................)))))))........(((....)))))))))))(((..((((............))))..)))........)))...)).)))))...).)))))).)

Thermodynamic Ensemble Prediction

(,(((((........,,,})}.},)(.((((((.{.(((({.((....(((...(((((((((((((((.....)))))))..{((({{{,,..,,.......................................................,))})))}........{{{....}},)))))))},{{..((((...,.....,..)))}..}},,||},,..}}}...)}.,))))...}.)))))).)