Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_KLHL1_0002200

Sequence Length

377 nt

GC Content

0.4005

AAAUCAAGAGUUUUUACUCCUUCCAGCUGAGGAGCUCCAUAAACUACUGGCCAGUGAUGAUGUCAAUGUUCCUGAUGAAGAAACCAUCUUCCAUGCAUUGAUGAUGUGGGUCAAGUAUGACAUGCAGAGUAGAUGCAAUGACCUGAGCAUGCUUCUUGCCUUUAUAAGACUGCCACUGCUUCCACCACAGAUAUUGGCUGACCUAGAAAAUCAUGCAUUAUUUAAGAAUGAUCUGGAAUGUCAAAAGCUGAUUCUAGAAGCAAUGAAAUACCAUCUAUUGCCAGAAAGAAGAACUUUAAUGCAAAGUCCGAGAACUAAACCCAGAAAAUCUACAGUCGGAACUUUGUAUGCUGUAGGAGGAAUGGAUAACAACAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-80.50 kcal/mol

Ensemble Metrics

Free Energy: -88.29

Frequency: 0.0000

Diversity: 111.66

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........(((((((.((((((((((...((....))........(((((.(..((((..((((((((...((..(((((.....))))))).)))))))).((((((((((.((((.((.......))..))))..))))))..))))((.(((((......)))))..))((.((((((.....(((...(((((....(((((...((((.............)))))))))...)))))...)))......)))))).))......))))..).)))))((((.....)))).(((((((((((((........................)))).)))))))))))))..)))))).)))).))).......

Thermodynamic Ensemble Prediction

.........{{{{((,,(((({{((((.,.({....)}........(((((.({{((((.,{(((,((({...,..(((((.....))))).{{(((|||((..(,(((((((.{{{{|,|.,{{{..||..}}}}..}}.,,,,.|)))||.(((({......)))))..||{{.{{{{{,.....|||...,||||}}}}|||,|..}||||}},|.........}}}}|||||{..}|||....}))))}))})))))).))}.....)))).})}))))){{((.....)))}.(((((((((((((........................)))),,)))))))))))).,))))}}.}}}}.,,}.......