Sequence Details

BLAST PRIMER
Symbol
hsa_LIN54_0000700
Sequence Length
313 nt
GC Content
0.3962
CAUAAUCCCAUCAGAGUCGGCCAGUCGGCCCCGAAAGCCCUGUAAUUGUACAAAAUCACUGUGUUUGAAAUUGUAUUGUGAUUGCUUUGCAAAUGGUGAAUUUUGCAACAACUGCAAUUGUACUAAUUGUUACAACAAUUUGGAACAUGAAAAUGAAAGGCAAAAAGCAAUAAAGGCAUGCCUUGACAGAAAUCCAGAAGCCUUUAAGCCUAAGAUAGGGAAAGGAAAGGAGGGAGAAUCUGAUCGACGUCAUAGCAAAGGGUGUAAUUGCAAACGAUCAGGAUGUCUUAAAAACUACUGUGAAUGCUAUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-64.60 kcal/mol
Ensemble Metrics
Free Energy: -70.54
Frequency: 0.0001
Diversity: 83.61
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.......(((.(((.((((....))))..........((((....))))........((((((.(((((((..((((........((((.(((((....(((((.....)))))...))))).))))))))))))))).))))))........((((((....((.......)).))))))((((((..(((.....(((((...(((......))).....)))))..)))...)))).))((((((........(..(((....)))..)......)))))).........))).))))))((...))
Thermodynamic Ensemble Prediction
(((.......(((.(((.((((....)))).,.....,,,(((,....}}},...,,,.,((((((.(((((((.,((((,{,{...,((((,{{{{{...,|||||.....))))).,.}}}}}.,}))))))))))))).)))))),....,,.{(((({....{(.......}}.)))))},,,,....{{{.....(((({...(((,...)))),,}}))...}},{|{(.{.{(((((((..((,{{.(({.....))).,}.))...)))))))).).)))}.......})).))))))((...))
Back