Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LIN54_0005700

Sequence Length

250 nt

GC Content

0.3760

GUCUCUCUGUCACCCAGUCUGGAGUGCAGUGGGUGCUCCACUGCAGCCUUGACCCCCCAAGCUCAAAUGCUCCUCCCACGUCAGCCUCCCAAGUAGCUGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAUAACAAUAUCUGAAAGUGGUGUUAUUGGAUCAACUUUAAAUUCUACAACACAGACACCAAAUAAAAUAGCCAUCUCACCUUUGAAAUCGCCAAAUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.20 kcal/mol

Ensemble Metrics

Free Energy: -37.61

Frequency: 0.0008

Diversity: 41.85

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.........))(..(((.((..((((((((.....))))))))..)).)))......(((......))).........(((((..(....)..)))))....................................................................(((((((..((.....................))..))))))).........((.((.(((....))).)).)).......)

Thermodynamic Ensemble Prediction

((...,,{{,......(((.((..((((((((,...,))))))))..)}.)))......(((......))).........{((((..(....)..))))}...................................................................,(((((({..{(.,...................}).,))}))|,.........{{.,{.{{{....})).,,.)).......)