Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMO7_0005600

Sequence Length

250 nt

GC Content

0.3320

GCAGUAACAGAGAAGAAUUUUGAAACAAAAGAUUUUCGAGCCUCUCUAGAAAAUGGUGUUCUGCUGUGUGAUUUGAUUAAUAAGCUUAAACCUGGCGUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGUUUUCAUAUAACGAUUCAAAAGAGUGGGAGGAAGCCAUGGCUAAGGCUCAAGAAACUGGACACCUAGUGAUGGAUGUGAGGCGCUAUGGAAAGGCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.80 kcal/mol

Ensemble Metrics

Free Energy: -40.25

Frequency: 0.0007

Diversity: 55.47

Structure Visualization

Structure Prediction

MFE Structure Prediction

(............((((((((.......))))))))).(((((.(((.....((((((....(((...((((...))))...))).....(((.(((((.....................................................((((((......(.((((....)))).)..))))))(((.((((.((.(((......)))...)))))).)))))))).)))))))))))).))))).

Thermodynamic Ensemble Prediction

((((.{((({(({{(,.,(((({{,...,,..,))))}||,|}}}}|.......,,|)))))})(...{.,.....,.....(((({...(((((((((......................................................,{(((......(.((((....)))).)..,))}}((((.((({,((.(({......)})...)))))).))))......))))))).))..)))))}