Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMO7_0005700

Sequence Length

250 nt

GC Content

0.2960

GCAGUAACAGAGAAGAAUUUUGAAACAAAAGAUUUUCGAGCCUCUCUAGAAAAUGGUGUUCUGCUGUGUGAUUUGAUUAAUAAGCUUAAACCUGGCGUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUACCAAAGACAGAAGAAGCAUCUUCAGGUUUUCUUCCUGGUGACAGGAAUAAAUCCAGAUCUACUACUGAACUGGAUGAUUACUCCACAAAUAAAAAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.90 kcal/mol

Ensemble Metrics

Free Energy: -41.26

Frequency: 0.0043

Diversity: 41.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((((((.(...(((((((........))))))).)))))..........))))))))(((...(((((........(((.......)))............................................................(((((.(((((....)))))..))))).((((((....))))))...((((((.((.......)).))))))..........)))))....)))

Thermodynamic Ensemble Prediction

({((,((((((((,(...(((((((........))))))}.}))))}.......{{|}}}}}||({{.,,((,{{,,,,...,||{...,,,.}}}............................................................{((((.(((((....)))))..))))).((((((....))))))...((((((.((.......)).))))))..,}}}}}{,},,,,....,))