Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMO7_0013500

Sequence Length

428 nt

GC Content

0.5280

UAGAAGGAAUUCAGACUCUGAGGAUGAGGACUCAGGUUCUGACAGAAGCGCCACCGUUUUUAGUAGAGCACAAAAAGCAGAGCAUAGGCUAGACGGCAACUGCCAAAGACCUUCACUCUUGCUGGAAUUAGCUACCAAACGGGCUGUAAAAUCACCGGACUCCCAUGCAGCCAGGAGAAGCAGUAGUGCUUCGGAUGAGCCCAGGAAGCUCUGAUUCGGUGGUUCCUGAUCUUCCAGUUCCAACCAUCAGUGCCCCGAGUCGCUGGGUGUGGGAUCAAGAGGAGGAGCGGAAGCGGCAGGAGAGGUGGCAGAAGGAGCAGGACCGCCUACUGCAGGAAAAAUAUCAACGUGAGCAGGAGAAACUGAGGGAAGAGUGGCAAAGGGCCAAACAGGAGGCAGAGAGAGAGAAUUCCAAGUACUUGGAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-128.10 kcal/mol

Ensemble Metrics

Free Energy: -134.93

Frequency: 0.0000

Diversity: 137.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...(((((((...(((((((........))).(((((((........((((((((((((.((.....)).))))))..(((....)))....(((....)))...........(((((((((......(((.((...(((............)))((.((((((((..((((..((((((....))))))....((((.......))))((((((((.(((..(((((...............))))).))))))))))))))))))))))))).......))))).....))))))))).))))))........)))))))((((.(((((.(...........).))..(((......))).........((((.....))))..))).))))..))))...)))))))...))(((....)))

Thermodynamic Ensemble Prediction

((...(((((((...(((((((........)))}|((((((.,{{{{{((...,|}}}}}}.|}}))))......,{{.,(({....|||....{||...,|||,....|||{{,((((((((,,...,,(((.{{...,.|||||,.....{,||,,.,{{{,.|||,|||,...((((((....)))))),..||.||,({{(,{,(,(({.,{|||,}.||||||.((((({.((((({,{{.{(((((,{....}.)))))))),)))))).....))))))||....}),}}||}}}.||||||,{..,..,,.,}.})|))}.))))..........,,....,.},))))))...})))),,..,..}|||.....)))}..}.}..)))...}}).,.)))))))...))(((....)))