Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMO7_0017700

Sequence Length

379 nt

GC Content

0.3668

GAGUAAGUCCAUGAGUGAUGUCAGCGCAGAAGAUGUUCAAAACUUGCGUCAGCUGCGUUACGAGGAGAUGCAGAAAAUAAAAUCACAAUUAAAAGAACAAGAUCAGAAAUGGCAGGAUGACCUUGCAAAAUGGAAAGAUCGUCGAAAAAGUUACACUUCAGAUCUGCAGAAGAAAAAAGAAGAGAGAGAAGAAAUUGAAAAGCAGGCACUUGAGAAGUCUAAGAGAAGCUCUAAGACGUUUAAGGAAAUGCUGCAGGACAGAAUAUUGAAUCCAAAGAAAUCAAUGGAAUUCAUGAUGAAAGCAAUGCUUUUGAAUCAAAAGCAUCUGAAUCCAUUUCUUUGAAAAACUUAAAAAGGCGAUCACAAUUUUUUGAACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-76.90 kcal/mol

Ensemble Metrics

Free Energy: -83.56

Frequency: 0.0000

Diversity: 53.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((....((((...((((((.(((((((..(((((.........)))))..))))))))).....(((............))).................))))...))))....))..)(((((((((......(((((((....(((((...((((...(((.................)))..)))).........((((....((((((..((((.((((...)))).)))).))))))....))))....................(((((((....(((((.((((.((.........((((((((...))))))))))))))))))))))))))...))))).....)))))))......)))))..))))

Thermodynamic Ensemble Prediction

(.((....((((...(((({(.(((((((..(((((.........)))))..)))))))}}.....{{{............})).................))))...))))....))..)(((((((((......(((((((....(((((...((((...(((...............}}},,..}}}}.........,(((,.,.((((((..((((.((((...)))).)))).))))))....))))}}....,,......,,..,,(((((({....{((({,((((.({,........((((((((...))))))))))))))))))))))))))...))))).....)))))))......)))))..))))