Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMO7_0021200

Sequence Length

166 nt

GC Content

0.4096

CAUCUGAAUCCAUUUCUUUGAAAAACUUAAAAAGGCGAUCACAAUUUUUUGAACAAGGUCAGUCAGUGGGAAGCGCAUAUGCUCCUACUGCAAUAACAUUCUGGGCAAAGGAGCCGCCAUGAUCAUCGAGUCCCUGGGUCUUUGUUAUCAUUUGCAUUGUUUUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-26.20 kcal/mol

Ensemble Metrics

Free Energy: -31.40

Frequency: 0.0002

Diversity: 51.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((.(((.....)))...))....(((((((.((((.......(((((((..((..((....((((((((.((......)))))))))).....))....))..)))))))..))))(((((.((.(((.((...)).))).)).)))))........)))))))

Thermodynamic Ensemble Prediction

{{..,(({.....}}}.,|||....,{{{{|,.{(((,,,....,,,,{||..{,.|{|,.{.((((((({,((,....,)))))))))),....,,....,}{{|,,}}},}})|}}{{(((.{{.{({.{{...)).))).)).))))}.})|....,},}}})