Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LMTK2_0001100

Sequence Length

250 nt

GC Content

0.3960

GGGAGGCGCCACCUGCUGCAGAAGUUUCCUCAUCUUUUGUGAUCCUGUGUGUGUGCAGUUUAAUAAUAUUAAUAGUGUUAAUUGCAAACUGUGUAUCCUGCUGUAAGGACCCAGAAAUAGACUUUAAGGAGGAUUAUAUUGAAACAGAUGAUAAAAAAGUUUUCCCUCUGCGAUGGACUGCUCCAGAAUUAGUAACCAGCUUUCAAGACAGACUGCUAACUGCAGAUCAGACUAAGUAUAGUAAUAUCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.50 kcal/mol

Ensemble Metrics

Free Energy: -53.02

Frequency: 0.0000

Diversity: 96.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.((..(((.....((((((............((((((.(((.(((..((.((((((....(((((((...))))))))))))).)).(((((((((.((..(((..............)))..)).)))).)))))....)))))).))))))..........)))))).))).)).)))((((((((.((....((((...((.(.((((((.....)))).)).).)))))).)).)))).))))

Thermodynamic Ensemble Prediction

((({((..{{{,|,.,|{((((.({{...{,,,{(({({({(({{({(,.{(.{(((((({,,(({(({,...}})))))})))}}.,}|{{(,{((((.{{..{||,.............)))..}).)))))}))},.,..,|}}}}|},,}},....,.....))))}}.}}}.,}.))){{((({{(.({....{{{{...,{.,.||((((.....)))).)).,.}})))}.}).)))).))))