Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LPAR1_0005800

Sequence Length

250 nt

GC Content

0.3360

GUGUCAUCCUUGAAGGAUAGAAUAAAUCAGCUGUCGUGUUCUCAGUGAAAAGUGGAAAGAAGUUUUAAAGGAUCUGCAAAAUAGAAUUAUGAGACAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUUUUUUUUUUUUUUUGAGACAGGGUCUCACUCGUUGCUCAGGCUGGAGUACAGUGGUGCCAUCACAGUAUACUGCAACCUCCACCUCCUGGGCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.50 kcal/mol

Ensemble Metrics

Free Energy: -45.48

Frequency: 0.0003

Diversity: 36.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((....(((((.(.(((((..........))))).)..((((((.((((((.((((((((((((....))))(((....(((....)))....))).....................................................)))))))).)))))).)))))))))))...)))(.(..(((((((.(((((..(((((.(((.......))))))))....)))))...))))))).).)

Thermodynamic Ensemble Prediction

(((..{{(((,{.{.(((((..........))))).}..((((((.((((((.((((((((,{({....,)}((((....(({....)})..,.)))}....................................................}))))))),)))))).)))))))))))}..)))(.,..(((((((.(((((..(((({{(((.......))))))))....)))))...))))))).,.)