Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRBA_0026400

Sequence Length

432 nt

GC Content

0.4236

UCUGUUUACUUUCUUUAUUACAGAAGUGUCAUUGUUGCAGCAAAAAAGUCAGCAGUCUCACCUUCCACCUUUAAUACAAGCAUACCUACCAAUGCUGUCAGUGUGGUUUCCUCAGUAGAUUCAGCCCAAGCCUCAGAUAUGGGAGGAGAAUCACCAGGCAGUAGAUCAUCUAAUGCAAAAUUGCCCUCAGUUCCAACAGUUGAUUCAGUUUCACAAGAUCCGGUUUCAAAUAUGAGUAUUACAGAGAGGCUUGAACACGCUUUGGAAAAGGCAGCUCCUCUCCUUCGUGAGAUUUUUGUGGAUUUUGCACCUUUUCUUUCUCGGACACUUUUGGGUAGCCAUGGACAAGAACUGCUUAUAGAAGGAACAAGUCUGGUUUGCAUGAAGUCGAGUAGUUCAGUUGUGGAAUUGGUUAUGCUACUGUGUUCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.30 kcal/mol

Ensemble Metrics

Free Energy: -100.14

Frequency: 0.0000

Diversity: 162.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((..............))))).(((..(((((((..((......)))))))))..)))...((((((.....(((.((((........))))))).)).))))........(((((.((.((..(((.((((.....((((((((.........(((.((((...)))).)))....(((((.....((((((.(((((.(((((((((............((((....)))).........))))).)))))).)))))))))..))))))))))))).....)))).)))..)).)).)))))..............((((((....(.(((((((...(((((((((((((.......((((.......))))..........)))))))))..)))).....))))))).)....))))))....

Thermodynamic Ensemble Prediction

(((((..............))))}.(((..(((((((..{(......)})))))))..)))...,.,,.....,,(({(((((,.......,|||||{{.{.{{|{{{{{{{{.(((,,,,..((....}},,,,..}}},,||||||,,}}}}}.}|||}||{,...,}},.}||....,|||{..,,,((((((,((((({(((((((((,,..{{,,..{{(((...,,||||,{.....|{|||||,.}},,,.|||||}}}}}})))}}}}})))}}....,||||||||..,,}))}}))))......,,,,,{,.({,{({...,{|||,{|||.},|||}|||,|||||}}}...}}}}|..,,}}}}}}},,.}}}},.,)))}}},))}}})))}}}}})))})))}),..}))))),..,,