Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRBA_0043600

Sequence Length

333 nt

GC Content

0.4054

UUGGUAGGAGGACAGUUUGAUCUGGAAAUGAAUUUCAUUAUCCAAGAAGGUGAGAGUAUUAACUGCAUGGUGGACCUACUGGAAAAAUGUGACAUUACGUGCCAAGCAGAAGUCUGGAGCAUGUUUACAGCCAUUCUGAAGAAAAGCAUACGGAAUCUUCAAGUCUGCACUGAAGUAGGCCUUGUUGAAAAAGUGCUUGGGAAAAUUGAAAAAGUUGACAAUAUGAUAGCAGAUCUUUUGGUUGACAUGUUGGGAGUGCUGGCUAGCUAUAAUUUGACAGUUCGCGAGCUAAAGCUUUUCUUCAGUAAACUUCAAGGAGAUAAAGGACGAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-69.60 kcal/mol

Ensemble Metrics

Free Energy: -77.90

Frequency: 0.0000

Diversity: 91.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((...((.(.(((.((((((((((((...))))).)))....)))).))).).))..))))........((....))...((((...))))((((((....(((....)))..))))))...)))(((((((((((((((((..((....((..(((((((((......))))).))))..))....))(((((.((..((((...((((((.(((((((.((((.((....)).)))).))))))).....(((....)))..))))))..)))))).)))))....)))))))))))).......................)))))

Thermodynamic Ensemble Prediction

(((((((...,,{{.{{{.,(((((((((((...))))).)))}.,.,}||.}}}.|.,,..}}||.{{,{,..||}.},},....{{{,,.,,,}||{|||,,..({|..,,))}..}))))),..)))(((((((((((((((((..{{....((..(((((((((......)))))},)))..))....}}(((((.((,.,{({...{{{{{,.(((((((.((((,{{.,..}},})}}.)))))))..,,,{{|.,|,}}},.,,,}}}..}))))).)))))....))))))))))))....,{,.....,,.........)))))