Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0002200

Sequence Length

378 nt

GC Content

0.3730

ACCUGUCGCGAAAUCGCCUUUCAGAAAUUCCUAUAGAAGCAUGUCACUUUGUUUCUCUGGAAAAUCUCAACUUGUACCAAAAUUGUAUUCGUUAUAUUCCAGAGGCAAUUUUAAACCUACAAGCUCUAACAUUCUUAAAUAUUAGUCGGAACCAACUGUCAACAUUGCCGGUACACUUGUGUAAUUUGCCAUUGAAAGUCUUAAUUGCUAGUAAUAACAAAUUGGUGUCACUUCCAGAAGAAAUUGGACACCUUAGACAUUUGAUGGAACUUGAUGUGAGCUGCAAUGAAAUUCAAACUAUACCUUCCCAAAUUGGUAACCUGGAGGCCUUGAGAGACCUUAAUGUAAGAAGAAAUCACCUAGUACAUUUGCCUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.40 kcal/mol

Ensemble Metrics

Free Energy: -70.87

Frequency: 0.0000

Diversity: 61.72

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.(.(((....))).....(((..((((...(((((((........)))))))..))))..)))...((((((..((((((((..((...........)).)))))))).....)))))).....................(.(((......))).)..((((((.(((.(((.....(((.((.((((((((.((((......................((((((..(((.....)))....))))))..)))).)))))))))).)))..))).)))))))))............((((..........))))....).))).(((.((.(.....((((((...((.......))..))))))..))).)))

Thermodynamic Ensemble Prediction

.{((.,.(((....)))...,,(({..((((...(((((((........))))))).,))))..}}}...((((((..((((((((.{((...........))})))))))).....))))))..,,,,..,..........,||.{{{......}}}.,..((((({,(((.(((.....({{.,,.((((((((.((((...,,,.,,....,,.},,...((((((..{((.....)}}...,))))))..)))).)))))))),,.}}},.))).)))))))))............((((..........))))...,)}))).(((.((.{.....((((((,...{.......}}..)))))).,))).)))