Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0002300

Sequence Length

515 nt

GC Content

0.3961

ACCUGUCGCGAAAUCGCCUUUCAGAAAUUCCUAUAGAAGCAUGUCACUUUGUUUCUCUGGAAAAUCUCAACUUGUACCAAAAUUGUAUUCGUUAUAUUCCAGAGGCAAUUUUAAACCUACAAGCUCUAACAUUCUUAAAUAUUAGUCGGAACCAACUGUCAACAUUGCCGGUACACUUGUGUAAUUUGCCAUUGAAAGUCUUAAUUGCUAGUAAUAACAAAUUGGUGUCACUUCCAGAAGAAAUUGGACACCUUAGACAUUUGAUGGAACUUGAUGUGAGCUGCAAUGAAAUUCAAACUAUACCUUCCCAAAUUGGUAACCUGGAGGCCUUGAGAGACCUUAAUGUAAGAAGAAAUCACCUAGUACAUUUGCCUGAAGAGCUGGCGGAGUUGCCUUUGAUACGGUUAGACUUCUCAUGCAAUAAAAUUACCACAAUCCCUGUUUGUUAUCGGAACCUCAGGCACCUACAGACGAUCACCCUAGAUAACAAUCCACUACAAUCACCUCCUGCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-88.30 kcal/mol

Ensemble Metrics

Free Energy: -99.41

Frequency: 0.0000

Diversity: 114.18

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((..(((....)))....)))...((((...(((((((........)))))))..))))........((((((..((((((((..((...........)).)))))))).....))))))....................((((..((((...((((((((((((.(((.(((.....(((.((.((((((((.((((......................((((((..(((.....)))....))))))..)))).)))))))))).)))..))).)))))))))..........................(((((((((..((((((.((.(.....((((((...((.......))..))))))..))).))).)))..))).)))))).)))))).)))).)))))((..((((...................(((((((....((..((...))..)).)))))))(((......))).......................)))).))

Thermodynamic Ensemble Prediction

...{({.(((....}}}....,{({..((((...(((((((........)))))))..))))..}}}...((((((..((((((((.{((...........)),)))))))).....))))))..,,,,..,..........,||,,{{,.....|||,|..((((({,(((.(((.....({{.,,.((((((((.((((...,{,.,,....,,.},....((((((..{((.....)}}...,))))))..)))).)))))))),,.}}},.))).)))))))))............{(((..........)))}..,,({{((,.{({((.,..}}}|{{(({....{....,..||.,||}}},{((((({,|.((|,(.((((({{((........)))..)))))),),.))............,,,.....,{,||||...,}}..,,))))))}..,,},}..}||,......|||....,,,...........}}}}},),)}},