Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0003400

Sequence Length

444 nt

GC Content

0.3559

ACCUGUCGCGAAAUCGCCUUUCAGAAAUUCCUAUAGAAGCAUGUCACUUUGUUUCUCUGGAAAAUCUCAACUUGUACCAAAAUUGUAUUCGUUAUAUUCCAGAGGCAAUUUUAAACCUACAAGCUCUAACAUUCUUAAAUAUUAGUCGGAACCAACUGUCAACAUUGCCGGUACACUUGUGUAAUUUGCCAUUGAAAGUCUUAAUUGCUAGUAAUAACAAAUUGGUGUCACUUCCAGAAGAAAUUGGACACCUUAGACAUUUGAUGGAACUUGAUGUGAGCUGCAAUGAAAUUCAAACUAUACCUUCCCAAAUUGGUAACCUGGAGGCCUUGAGAGACCUUAAUGUAAGAAGAAAUCACCUAGUACAUUUGCCUGAAGAUUAAUUUGAAUCAAAUACAGAAAUUUAUUGGUAAACAUUCCAGAAAAACAAGGAAUCUUCUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.70 kcal/mol

Ensemble Metrics

Free Energy: -85.30

Frequency: 0.0000

Diversity: 72.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.(.(((....))).....(((..((((...(((((((........)))))))..))))..)))...((((((..((((((((..((...........)).)))))))).....)))))).....................(.(((......))).)..((((((.(((.(((.....(((.((.((((((((.((((......................((((((..(((.....)))....))))))..)))).)))))))))).)))..))).)))))))))............((((..........))))....).))).((((((((......(((((...((.......))..)))))(((((...(((((..((((.........)))))))))...)))))..(((((..........))))).))))))))

Thermodynamic Ensemble Prediction

.(((.,.(((....))).....(((..((((...(((((((........)))))))..))))..)))...((((((..((((((((.{((...........)),)))))))).....))))))..,,,,..,..........,||.{{{......}}}.,..((((({,(((.(((.....({{.,,.((((((((.((((...,,,.,,....,,.},,...((((((..{((.....)}}...,))))))..)))).)))))))),,.}}},.))).)))))))))............((((..........))))....)}))).((((((((,{{{{,{((({.,..{.......}}..))))}|{{{(.,.,((((..{{{{,,,,...,.)))}}}}}}.,,))}},..,{{||........,})),,)}})))))))