Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0007100

Sequence Length

462 nt

GC Content

0.4459

AGCUGGCGGAGUUGCCUUUGAUACGGUUAGACUUCUCAUGCAAUAAAAUUACCACAAUCCCUGUUUGUUAUCGGAACCUCAGGCACCUACAGACGAUCACCCUAGAUAACAAUCCACUACAAUCACCUCCUGCACAGAUAUGUAUAAAAGGCAAAGUCCACAUAUUUAAAUACCUGAACAUACAAGCUUGUAAGAUUGCUCCAGAUCUGCCGGAUUAUGAUAGGAGACCGUUGGGUUUUGGCUCCUGCCAUGAAGAACUGUACUCAAGUCGCCCUUAUGGAGCCCUUGAUUCAGGCUUCAAUAGUGUGGACAGUGGUGAUAAGAGAUGGUCAGGGAAUGAACCUACAGAUGAAUUUUCAGAUCUGCCUCUUCGAGUAGCAGAGAUUACUAAAGAACAAAGACUACGAAGAGAAAGCCAGUACCAAGAGAACCGCGGCAGUUUGGUAGUAACAAACGGCGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-107.70 kcal/mol

Ensemble Metrics

Free Energy: -115.14

Frequency: 0.0000

Diversity: 123.42

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((..(.(((((((((........)))..)))))).)..))................(((((((((((((((.((((.(((..(.(((...(((.(((......(((....)))((((((.....(((..((.(((....))).))..)))....((((((((.........((((..((((....((.(((.((((......))))))).))..)))).))))(((((....)))))((((....))))(((((..(((...(((((..((((....)).)).)))))..))).)))))...)))))))).))))))......))).)))))))..))).....(((((..........))))).((((((((((........((....))........))).)))))))...(((.((............))))).)))).)..))))))))))).))).

Thermodynamic Ensemble Prediction

.((((({(((((((((........)))..)))))),}..,,.............,..(((((({(((((((({(..{.,,.|,,.,|....|{{.{{{..,,..|||,,,,},|((((.,.,{{{((,,.({,(({....))).....}))....((((((((..,......((((,.{{((....{{.{{,{((((......)))))}}.}).,||||.||||(({((,...}}}},||||,,,,)}))|||{{..{{{...(((((..((((....)).)).))))).}))),}))}),..)))))))).},)))))}...}),)})}))))),.}}......(((((,,....,,..})))).((((((((((........{{.....,........))).)))))))...|||,}|.,,.......|.,|}}}.|||||}..}},,)))))})}))}.