Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0008300

Sequence Length

551 nt

GC Content

0.4501

AUAUGUAUAAAAGGCAAAGUCCACAUAUUUAAAUACCUGAACAUACAAGCUUGUAAGAUUGCUCCAGAUCUGCCGGAUUAUGAUAGGAGACCGUUGGGUUUUGGCUCCUGCCAUGAAGAACUGUACUCAAGUCGCCCUUAUGGAGCCCUUGAUUCAGGCUUCAAUAGUGUGGACAGUGGUGAUAAGAGAUGGUCAGGGAAUGAACCUACAGAUGAAUUUUCAGAUCUGCCUCUUCGAGUAGCAGAGAUUACUAAAGAACAAAGACUACGAAGAGAAAGCCAGUACCAAGAGAACCGCGGCAGUUUGGUAGUAACAAACGGCGGAGUGGAACAUGAUCUGGAUCAGAUUGACUACAUAGACAGCUGCACCGCAGAGGAAGAGGAGGCCGAGGUGAGACAGCCCAAGGGACCAGACCCAGACAGCCUUAGUUCACAGUUUAUGGCGUAUAUUGAACAGCGGCGAAUCUCUCAUGAGGGUUCACCAGUAAAGCCAGUAGCCAUUAGGGAGUUUCAAAAAACAGAAGAUAUGAGAAGAUAUUUACAUCAAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-124.00 kcal/mol

Ensemble Metrics

Free Energy: -136.53

Frequency: 0.0000

Diversity: 188.68

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((......((......))))))))((.............((((....))))(((((......)))))((((..(((((.((((((.(((........))))))))).)))))....((((.((((..(((.((((.(((((((.........)))))))...((((((.((((..((((.......(((((.....)).)))..(((((.(..(((((..(((((((((((((((........((....))........))).))))))....(((.((............))))).(((((.......))))))))))).)))))..).))))).)))).)))).))))))...(..((((...))))..).....)))).)))..)))))))).....(((......))).....(((.(((........))).))).............))))(((.(((((.(((.((((.((..((...))..)))))).)))))))).)))..........((((((......))))))..........))

Thermodynamic Ensemble Prediction

({{(((......{{,...{{||||||}}{,.....(((({.,.(({..{(({{{,,{{{(,.{{{,}}|||{{{{,.{((((.{{{(((,(({...,,,..}}||}}}}),))}}}.{.,((({.{((,,({{((((,..{||{||{,,,,,..,})))))))..,||}}}}}},|,||||}}..}}}}|||||(((....,..))}.(((((.{..,,||{.,||||,((((((((((........{{.....,........))).)))))))...{{{.,{.,,.......,.,,})}.{{||{,,,....)}}}))))))).)))),,.},}}|||,.|))},)),||,,|{{{{{{..((((.,,)))}.,{,,...{{{((,{.(((......))}...(((......))).....)))))..}}}.,.}}}}}||{{,,.,,,||..,.||((.(((((((....))})}))).)).}}.,,)),.))),},.)))))..|{{{,...,,}}.,.{(((((......)))))).,.,,.....})