Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0009900

Sequence Length

441 nt

GC Content

0.4626

CCAUGAAGAACUGUACUCAAGUCGCCCUUAUGGAGCCCUUGAUUCAGGCUUCAAUAGUGUGGACAGUGGUGAUAAGAGAUGGUCAGGGAAUGAACCUACAGAUGAAUUUUCAGAUCUGCCUCUUCGAGUAGCAGAGAUUACUAAAGAACAAAGACUACGAAGAGAAAGCCAGUACCAAGAGAACCGCGGCAGUUUGGUAGUAACAAACGGCGGAGUGGAACAUGAUCUGGAUCAGAUUGACUACAUAGACAGCUGCACCGCAGAGGAAGAGGAGGCCGAGGUGAGACAGCCCAAGGGACCAGACCCAGACAGCCUUAGUUCACAGUUUAUGGCGUAUAUUGAACAGCGGCGAAUCUCUCAUGAGGGUUCACCAGUAAAGCCAGUAGCCAUUAGGGAGUUUCAAAAAACAGAAGAUAUGAGAAGAUAUUUACAUCAAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-98.40 kcal/mol

Ensemble Metrics

Free Energy: -107.41

Frequency: 0.0000

Diversity: 111.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((...(((((..(((((..((((....)).)).)))))....((((((.....(((((...(((((......(..(((((((....(((.....(((((.(..(((((..(((((((((((((((........((....))........))).))))))....(((.((............))))).(((((.......))))))))))).)))))..).)))))..)))..)))))))..).....))))).))))).........))))))(((.((((...((....(((......))).....)))))).))))))))))))))(.....((((........(((.(((((.(((.((((.((..((...))..)))))).)))))))).)))..........((((((......))))))...))))....)

Thermodynamic Ensemble Prediction

((((({.,{(((((.,((,,({{((((,..{||,||{||||.....||||||,.,.,({{{{.,,((|{(,.,..,,,.(((((((....(((.{{..{((((.(..(((((..(((((((((((((((........{{....,,........))).))))))....(((.({............,,))).(((((.......))))))))))).)))))..).))))),.)))..))))))),.,...,.}||||.}}))),..,.....|||||}|,({(,.,...}}},..(((......))).,...}}))),,)))}))))))))))(,,...((({...,,{{.((({(((,,.,||,||||},|}.||...,}..}}}}||.,,,))},|,||}....,,,.,.((((((......)))))).,.)))}.,,.)