Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0012100

Sequence Length

391 nt

GC Content

0.4885

CCUACAGAUGAAUUUUCAGAUCUGCCUCUUCGAGUAGCAGAGAUUACUAAAGAACAAAGACUACGAAGAGAAAGCCAGUACCAAGAGAACCGCGGCAGUUUGGUAGUAACAAACGGCGGAGUGGAACAUGAUCUGGAUCAGAUUGACUACAUAGACAGCUGCACCGCAGAGGAAGAGGAGGCCGAGGUGAGACAGCCCAAGGGACCAGACCCAGACAGCCUUAGUUCACAGUUUAUGGCGUAUAUUGAACAGCGGCGAAUCUCUCAUGAGUCGCUGUCAGGGUUGAAUCAAGUGGGCUGUGCUGCUACCCUGCCUCAUUCUUCUGCCUUCACGCCUCUUAAGAGUGAUGACAGACCUAAUGCUCUAUUAAGUUCACCUGCAACAGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-104.10 kcal/mol

Ensemble Metrics

Free Energy: -113.37

Frequency: 0.0000

Diversity: 95.18

Structure Visualization

Structure Prediction

MFE Structure Prediction

....(((.(((((((..(((((((.((((((((((........((....))........))).))))))).....................(((((.((((((((((.........((((...........))))..........))))).))))).)))))...(((((((((...(((((.(.((((((((((((((...((...(((((.....(((.(((........))).)))......(((.(((((((.............)))))))))))))))...))...)))))))).))..))))).))))).)))))))))..((((((((....)).))).)))))))........)))...))))))).)))............

Thermodynamic Ensemble Prediction

....(((,({(,,{{,,,.,||||,((((((((((........{{.....,........))).)))))))...|,,.,,............{{|||.((((({{{{,..}}}}|.||||,,||}....,,|||||...|||,|||}||}}.}))}).))))}...(((((((((...(((((.(.((((((((((((((...((...(((((..{{.(((.(((........))).))),,....{(,,(((((((...{,......,,)))))))))})))))...))...)))))))).)).,})))).))))).))))))))),.(((({,{{,...,),))),}},.||,......}.))).,.}}))))}.))).....,......