Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0012600

Sequence Length

340 nt

GC Content

0.4588

AUGAAUUUUCAGAUCUGCCUCUUCGAGUAGCAGAGAUUACUAAAGAACAAAGACUACGAAGAGAAAGCCAGUACCAAGAGAACCGCGGCAGUUUGGUAGUAACAAACGGCGGAGUGGAACAUGAUCUGGAUCAGAUUGACUACAUAGACAGCUGCACCGCAGAGGAAGAGGAGGCCGAGGUGAGACAGCCCAAGGGACCAGACCCAGACAGCCUUAGUUCACAGUUUAUGGCGUAUAUUGAACAGCGGCGAAUCUCUCAUGAGGGUUCACCAGUAAAGCCAGUAGCCAUUAGGGAGUUUCAAAAAACAGAAGAUAUGAGAAGAUAUUUACAUCAAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.30 kcal/mol

Ensemble Metrics

Free Energy: -74.82

Frequency: 0.0000

Diversity: 118.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..((((((.((((..((((((((((........((....))........))).)))))))...(((.............((((.((.(((((.......))))).))...)))).....((((((...)))))).....(((((((..((((...))))..(((...(((((...(((......)))...(((......))).....)))))..)))...)))))))((............)))))(((.(((((.(((.((((.((..((...))..)))))).)))))))).)))..........)))).))))))........)))(......)

Thermodynamic Ensemble Prediction

(((..{(((((.,((({{(((((({(((,.......||,,,...........}}}.)}}))}}...{{{.,,..........{,(({{(.(((((,,,,,..}}}}}.}|||.|||}....,{{|{({...}}}}}},}|},|.|||||.,||||.,,}}}}.,|..,,,|||||.|.{{(,.....}}},..(((......))).....|||||.{|}}...|||,|||{{,,.,,{||..,.,,||,((({(((,,.,||,||||},|}.||...}},,}})))},)))))),},}}}..........||||,|}}}},.,}}}}}.)))(......)