Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0013300

Sequence Length

278 nt

GC Content

0.4748

UGGAACAUGAUCUGGAUCAGAUUGACUACAUAGACAGCUGCACCGCAGAGGAAGAGGAGGCCGAGGUGAGACAGCCCAAGGGACCAGACCCAGACAGCCUUAGUUCACAGUUUAUGGCGUAUAUUGAACAGCGGCGAAUCUCUCAUGAGGGUUCACCAGUAAAGCCAGUAGCCAUUAGGGAGUUUCAAAAAACAGAAGAUAUGAGAAGAUAUUUACAUCAAAACAGGGUUCCAGCUGAGCCAUCUUCCCUCCUGUCACUAUCAGCAAGUCACAAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-61.00 kcal/mol

Ensemble Metrics

Free Energy: -66.33

Frequency: 0.0002

Diversity: 63.18

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((.(.((((....))))).)).)((.....(((.((((....(((((((..((((((((..((.((.((..((((..(((......))).....(((...(((((..((.........))..)))))...)))(((.(((((.(((.((((.((..((...))..)))))).)))))))).)))..........((((((......))))))...........)))))))).))..))).)))))))).))))......))))..)))......))

Thermodynamic Ensemble Prediction

({(,...{((({{{.,,)))})).,||,,...(((.((((....(((((((..((((((((..((.((.((..((((..(((......))).....,(((({((,....(({..({{{...{,{||,,,...||.((({(((,...|}}|||}}.}}.}},..))}},,))),})))))),}|||,........,.((((((......))))))...........)))))))).))..))).))))))))}})))......))))..)))......,)