Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0017600

Sequence Length

486 nt

GC Content

0.4774

UCGCUGUCAGGGUUGAAUCAAGUGGGCUGUGCUGCUACCCUGCCUCAUUCUUCUGCCUUCACGCCUCUUAAGAGUGAUGACAGACCUAAUGCUCUAUUAAGUUCACCUGCAACAGAAACAGUUCAUCAUUCCCCUGCAUAUUCUUUUCCUGCUGCUAUCCAGAGAAAUCAGCCUCAGCGCCCUGAAAGCUUCCUUUUCCGAGCAGGUGUCAGGGCAGAAACCAACAAAGGUCAUGCUUCACCCCUUCCUCCAUCUGCUGCACCUACCACUGAUUCUACAGAUUCCAUAACAGGACAGAAUUCAAGACAGAGAGAAGAAGAGCUGGAAUUAAUAGACCAACUGCGUAAACAUAUUGAGUACCGGUUGAAAGUGUCUCUACCUUGUGAUCUCGGAGCAGCUCUAACUGACGGUGUUGUUCUUUGCCAUUUGGCCAAUCAUGUGCGACCUCGAUCUGUCCCAAGCAUUCAUGUUCCCUCACCAGCUGUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-111.00 kcal/mol

Ensemble Metrics

Free Energy: -120.80

Frequency: 0.0000

Diversity: 157.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((..((((.(((((....((((..(.((((((.((((((.((((((((..((......)).....)))))))).).))).........((((((((.(((..(((...)))...((((((.((.((((.((((..(((((..(((((.((..(((...((((.((((.......(((((((..((((.(((....))).)))).)))))))............((((((.((...................)))).))))....))))))))...)))..))...))))).)))))....).))).).))))).))))))))))))))))).((((((.(((..((...))..))))))))).....(((.(......).)))...)))))))).)..((.(((((.(((((.(...(((....))).......).))))).))).)).))))))...)))))....))))...))))....

Thermodynamic Ensemble Prediction

..(((({.((((.,(((({..{((({..(,(({(({.{{,,{,.,{{{,,(({{(({,{.{{||{,...,,||||||,|,}}}......,{.{{{{{{{,{{{{..(((...}))...{{|{||,||,|||..{{({..{{{{{..{((((.{(..{{{..,(({{{{{((,.{{{{.,,,||||..({{{.,||....))),))))}),)))))}}},..,.....,|||...,,...................)),)})),,.,,,)))))))}...}}}..},...}}))).|||}}.,,,|.}||,|,}|}}}.}||||||}}||||||}}.{{(({{.{{{..{.,,,)),.}}))))))}...,,,||,|,..}}}).}}},,.||||||||.|.....,,{||.|||||,|},,(((....))).,,....}.}}}}}.,}).)).))))},.,,}}}}}.,..)))).}.))))....