Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0018600

Sequence Length

365 nt

GC Content

0.4740

UUCAUCAUUCCCCUGCAUAUUCUUUUCCUGCUGCUAUCCAGAGAAAUCAGCCUCAGCGCCCUGAAAGCUUCCUUUUCCGAGCAGGUGUCAGGGCAGAAACCAACAAAGGUCAUGCUUCACCCCUUCCUCCAUCUGCUGCACCUACCACUGAUUCUACAGAUUCCAUAACAGGACAGAAUUCAAGACAGAGAGAAGAAGAGCUGGAAUUAAUAGACCAACUGCGUAAACAUAUUGAGUACCGGUUGAAAGUGUCUCUACCUUGUGAUCUCGGAGCAGCUCUAACUGACGGUGUUGUUCUUUGCCAUUUGGCCAAUCAUGUGCGACCUCGAUCUGUCCCAAGCAUUCAUGUUCCCUCACCAGCUGUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.20 kcal/mol

Ensemble Metrics

Free Energy: -82.38

Frequency: 0.0000

Diversity: 78.30

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.((.(((..((....(((((..(((((.((..(((...((((.((((.......(((((((..((((.(((....))).)))).)))))))............((((((.((...................)))).))))....))))))))...)))..))...))))).)))))...))...))).)).))).((((((...........((((((.(((..((...))..))))))))).....(((.(......).)))...(((((((((...((.(((((.(((((.(...(((....))).......).))))).))).)).))....))).....))))))....))))))...

Thermodynamic Ensemble Prediction

{((.((.(((..{(,...(((((..(((((.((..(((...(({{{((((..,,,,.(((((((..((((.{{{....))).}}}}.))))))).{,.........{(((,,.{{..................,)))),))))....))))))))...)))..))...))))).)))))...,}...)}).)),))|.((((((........,,.((((((.(((..({...})..)))))))))...,.|||.{......}.}},...(((((((({,..,,.{{{||.|||||,|,,,(((....))).,,.,,,|,|}}}|.,}}.}}.)),...})),....))))}}....)))))).,.