Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRCH3_0019600

Sequence Length

257 nt

GC Content

0.4669

GUCAUGCUUCACCCCUUCCUCCAUCUGCUGCACCUACCACUGAUUCUACAGAUUCCAUAACAGGACAGAAUUCAAGACAGAGAGAAGAAGAGCUGGAAUUAAUAGACCAACUGCGUAAACAUAUUGAGUACCGGUUGAAAGUGUCUCUACCUUGUGAUCUCGGAGCAGCUCUAACUGACGGUGUUGUUCUUUGCCAUUUGGCCAAUCAUGUGCGACCUCGAUCUGUCCCAAGCAUUCAUGUUCCCUCACCAGCUGUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.20 kcal/mol

Ensemble Metrics

Free Energy: -49.81

Frequency: 0.0001

Diversity: 79.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((((((((.(.((((.((..((((((..........(((......)))..(((......))).........)).))))..)).)))).).))............((((((.(((..((...))..))))))))).))))))..)(((((.((((....(((((((((...((.(((((.(((((.(...(((....))).......).))))).))).)).))....))).....)))))).)))).))..)))

Thermodynamic Ensemble Prediction

(..(((({{{,...((((.((..((((((,.........,{({,{{,.,,|..{((......))),}}|,,.|,}}.)))),.)).)))){(((((..{{{{{{...,,{{,,.|{,..,.}}}))}.},))))))).,}})}),.){{{{{.{{{{....(((((((((...{{.(((((.(((({.|,{,(((....))).,,....}.))))}.})).)).)),...})).....)))))).}}}).))..)))