Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0007000

Sequence Length

354 nt

GC Content

0.4209

AUAAAAAGACUUGUGGACCUCAUGAAUUCCAGUGUAAAAACAACAACUGUAUUCCCGAUCACUGGCGGUGUGAUAGCCAAAAUGACUGCAGUGAUAAUUCAGAUGAAGAAAACUGUAAGCCACAGACAUGUACAUUGAAAGAUUUCCUCUGUGCCAAUGGGGACUGUGUUUCUUCAAGGUUUUGGUGUGAUGGAGAUUUUGACUGUGCAGAUGGCUCUGAUGAGAGAAAUUGUGAGACAAGUUGUUCCAAAGAUCAGUUCCGGUGUUCCAAUGGUCAGUGUAUACCAGCAAAAUGGAAAUGUGAUGGCCAUGAAGACUGCAAAUAUGGGGAAGAUGAGAAAAGCUGUGAGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.00 kcal/mol

Ensemble Metrics

Free Energy: -83.71

Frequency: 0.0000

Diversity: 84.65

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.....(((((((....(((((((((..((((((.......)).)))).))))...(((((((.((((...............)))))))))))..(((....))).....((((.....))))...((((((....(((((((((((..((((((((((((.......)))))).....)))))).)).)))))))))...))))))(((..((((....))))..))))))))))))))).........))(.((((((((.((((((((((((.......(((......)))........))))))).....((.((....)).))....)).)))..)))).))))..)

Thermodynamic Ensemble Prediction

(..........).(((..((((({..,..((((((.......}},})))..{((((.(((({(((({{{......,,,,.....}}||||||}}}..{((....}}}....}}}}},{((((......((((((....((((((((({(..{((((({{{((({,.,,..,}}})).,,,,)))))}.)}.)))))))))...))))))..))))|(({{{,,{||.,,{{||..,}}}},}}.})}},...}})}},,.((((.(((..(((((((...{{{.(((......)))..,}},..)))))))))).))))......},))))}.....,.....,})))))))).