Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0010600

Sequence Length

357 nt

GC Content

0.4314

ACACACAUGUCUGCCUGUCAGGUCAAUUCAAAUGUACCAAGAACCAGAAAUGUAUCCCAGUAAACUUAAGAUGUAAUGGGCAAGAUGACUGUGGUGAUGAGGAAGAUGAAAGAGACUGUCCUGAAAACAGCUGUUCUCCAGACUAUUUCCAGUGUAAGACUACGAAGCAUUGCAUUUCCAAGCUGUGGGUUUGUGACGAGGAUCCAGACUGUGCAGAUGCAUCAGACGAGGCCAACUGCGAUAAAAAGACUUGUGGACCUCAUGAAUUCCAGUGUAAAAACAACAACUGUAUUCCCGAUCACUGGCGGUGUGAUAGCCAAAAUGACUGCAGUGAUAAUUCAGAUGAAGAAAACUGUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.60 kcal/mol

Ensemble Metrics

Free Energy: -77.99

Frequency: 0.0000

Diversity: 116.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((.((((((((((.(.(((..........(((...((..((....))..))...))).......))).).)))))))....)))))))(((((..((((.......((((..(((..((.(((....))).))..)))..)))).(((((((..((....))..)))))))......(((((.((((((.((.((........)))))))))).)).)))..(((((((...((........).)...))).))))........((((((.......)).))))..))))..)))))((((.........)))).......((((((.....(((....)))....))))))

Thermodynamic Ensemble Prediction

.{,(({{.((((((((((.(.(((..........(((...{{..((....}},.}|...}}}.......}}}.).}))))),,})),.,))))(((((..((({.......((((..(({..({.{{{.,..))).))..)})..)))).{(((({{..{|....}},.}}|||}}..,,{{{(.{{||||||,,,..,|},||}}.}}}}|||||.|||,{|,...(((((({.,.|{........}.,...))).))))..||,,..((((({.......}}.})))..))))..)))))((((.,,......)))}.......((((((.....(((....)))....))))))