Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0012700

Sequence Length

354 nt

GC Content

0.4633

AAAACAGAAGCUGUCGAAGAGGCUUCAAGCCAUGCUAUAAUCGCCGCUGCAUUCCUCAUGGCAAGUUAUGUGAUGGAGAAAAUGACUGCGGAGACAACUCUGAUGAAUUAGAUUGUAAAGUUUCAACCUGUGCCACGGUUGAGUUCCGCUGUGCAGAUGGGACUUGUAUUCCAAGAUCAGCACGAUGCAACCAGAACAUAGAUUGUGCAGAUGCUUCAGAUGAAAAGAACUGCACUGAAAACAGCUGUUCUCCAGACUAUUUCCAGUGUAAGACUACGAAGCAUUGCAUUUCCAAGCUGUGGGUUUGUGACGAGGAUCCAGACUGUGCAGAUGCAUCAGACGAGGCCAACUGCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-88.50 kcal/mol

Ensemble Metrics

Free Energy: -96.41

Frequency: 0.0000

Diversity: 117.03

Structure Visualization

Structure Prediction

MFE Structure Prediction

......((((((........))))))..((((((....(((.((....)))))...)))))).((((((............))))))((((((((((.(((((....))))))))).....(((((((........)))))))))))))..(((((.(((..(((((............(((((((...............))))))).((((((((........((...(((((((.(((.(((((.....))).)).))).)))))))...))..))))))))((((((.((((.(.(((((((.......))))))).))).)).)))))).....))))).))).)))))

Thermodynamic Ensemble Prediction

,...({(..,||}}({.,{.(((({{.,((,,,|},....{,,({{{.{{{{{,.{{||,||{..,,,|}}.}}}}.}...})).).||||,|{(({.(((((....}))))}))}.....{((((((.,......))))))},}}}}|{{{(({(.((({,{{{{,..,,},.,,||.||||{{{,|,.,,....{{{{{,,|(((({{{((((((........,,...(((((((.(((.(((((.....))).)).))).)))))))...}}..)))))))))))}...|},.}|}||||||||,||,,,},,)))),,))}})}}),}}))}},,,.))))))..)).))