Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0016500

Sequence Length

372 nt

GC Content

0.4355

AACAGUCAUGCAACAGUUCAUUUUUUAUGUGCAAAAAUGGCAGGUGCAUUCCCAGUGGAGGUCUUUGCGACAAUAAGGAUGACUGUGGCGAUGGUUCAGAUGAGAGAAACUGCCAUAUAAAUGAAUGUUUGAGUAAGAAAGUCAGUGGAUGUUCUCAAGACUGUCAAGACCUUCCGGUCAGUUAUAAGUGCAAAUGCUGGCCUGGAUUCCAACUGAAGGAUGACGGCAAAACAUGUGUAGACAUUGAUGAAUGCUCUUCAGGCUUUCCCUGUAGCCAGCAAUGCAUCAAUACAUACGGGACUUACAAGUGCCUCUGUACAGAUGGGUAUGAAAUACAACCUGAUAACCCAAAUGGCUGCAAAUCGCUCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-88.60 kcal/mol

Ensemble Metrics

Free Energy: -98.18

Frequency: 0.0000

Diversity: 103.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((..((.(((((.(((((((..((((((((...(((...(((.......)))...)))))))).)))..)))))))))))).))))).)))(...((((((((((...(((....)))...))))......(((((((.(.(((((((((((...((((((...(((((.(((((((.............)))))))(((...)))...))))).))))))......((((....))))))).))))).))).).)))))))..((((((((......((((..((((...((.(((....))).))..))))..))))(((.((.....)))))............)))))))).....)))))))

Thermodynamic Ensemble Prediction

(((.(((..((.(((({{(((((((..((((((((...{((...,,{,{{,,..}}),,.))}))))),}))..)))))))))))).))))).)))(...((((((...,.(((((.....,,,.,|{{({{,..,{{,.(((....))).}})}}},|.((((((...(((((.(((((({............|))))))),((...}},...}}))).))))))|.....,{(({,,.,}||{|{{{,.||{|||.|||{,..,,},}}.})}})))}.},)))}}}||||,,.((.(((....))).)),,|}},.,},((((({(.,.........,.}),})))).})))).}.......)))))))