Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0016900

Sequence Length

393 nt

GC Content

0.4784

GUGCCAUAACCUGUGCUGCUGACAUGUUCAGCUGCCAGGGCUCUCGUGCCUGCGUGCCCCGACAUUGGCUUUGUGAUGGUGAAAGGGACUGUCCAGAUGGAAGCGAUGAGCUUUCCACAGCAGGCUGCGCUCCCAAUAAUACAUGUGAUGAAAAUGCUUUCAUGUGCCAUAAUAAAGUAUGCAUUCCCAAGCAAUUUGUUUGUGACCAUGAUGACGACUGUGGAGAUGGCUCUGAUGAGUCACCGCAGUGUGGAUAUCGACAGUGUGGUACAGAAGAAUUUAGUUGUGCUGAUGGGCGGUGUCUUCUAAAUACUCAAUGGCAGUGUGAUGGAGACUUUGACUGUCCUGACCAUUCUGAUGAAGCACCUUUAAACCCAAAGUGUAAAAGUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-116.00 kcal/mol

Ensemble Metrics

Free Energy: -123.37

Frequency: 0.0000

Diversity: 132.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

((......))((((((((((((.....))))).....(((....(((((((((..(((........)))((((.((((((.......))))))))))(((((((.....)).)))))..)))))).)))..))).......(((((((...........))))))).(((((..((((.(((........)))))))..))))).((((.......(((((((...((((((....)))))))))))))))))...(((.(((.(((((.((.......(((((...))))).(((((((((((((...((((((....).)))))...))))))....)))))))))))))).))).))).((((.(((......)))))))...)))))))

Thermodynamic Ensemble Prediction

(({{....,|(((,((,(((((.....))))).}}}}||,....,||||(((({.{{{....,...}||((((.{{{(((....,{.}|||||||||(((((((.....))}}}}}},,||}}}},}}},,}}}.......{{{{{|{,{,,...,,||||||{|{,(((({..{{{(,({(,....,,,||}}}}),,)))}),||}}},,..{.{((({{{...((((((....))))))|||||}|||,{...,}.,||,}|||||.{{,......,{{||,.,}))),.(((((((((((((...((((({....}.)))))...))))))....))))))),.,)))},))).,},,||||||||..,,,,))}))))...,})))))