Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0020500

Sequence Length

497 nt

GC Content

0.4044

AGCACAUGCAAACGGGUCUGUCAGAAGGGGCCACAAGAAUGAUGCCACAGAAACGAUAACCAUGAGAACCGGCCUUGGAGUCAACCUGAAGGAGGUUAAAAUAUUUAACCGAGUAAGAGAGAAAGGGACCAAUGUUUGUGCCAGGGACAAUGGUGGCUGUAAGCAACUCUGUCUUUAUCGAGGAAAUUCCCGGAGAACUUGUGCUUGUGCCCAUGGAUAUUUGGCAGAAGAUGGAGUUACUUGCCUGAGGCAUGAAGGCUAUUUACUGUAUUCAGGAAGAACAAUAUUAAAAAGUAUACAUCUUUCUGAUGAAACCAAUUUAAAUUCCCCAAUAAGGCCAUAUGAGAAUCCACGUUAUUUCAAGAAUGUCAUAGCCUUGGCUUUUGACUAUAAUCAAAGAAGAAAAGGUACCAACCGAAUCUUUUACAGUGAUGCACACUUUGGAAAUAUACAGCUUAUUAAAGACAACUGGGAAGACAGACAAGUAAUUGUUGAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-104.70 kcal/mol

Ensemble Metrics

Free Energy: -116.59

Frequency: 0.0000

Diversity: 122.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((.(((....(((((.((((....(((..((((......(((........................)))))))..)))...))))....(((((((...)))))))...............)))))..))).)))))....((((((..((.((((...(.....((((((((..(((...(((.(((((((((((...(((.((((...........)))).)))...)))))...((((...)))).....((...((((((((.(((((((((...(((((....)))))...))))))))).......................((((((..(((((.(.((.............)).).)))))))))))...(((((......)))))(((((...(((....)))...))))))))))))).))...)))))).)))......)))..)))))))).....)...)))).))....))))))....

Thermodynamic Ensemble Prediction

..,,,,.((({((..(((((((....,,(((..({....})..))).,......{,,..,{{,,....,,,,{|{|||.,,,..{||.,,,,.||||,,....,}}},||{{..{{{{.{{{..,,.((((.(((((.,...,.))))).)))),{{|.,.}}}..,))).}}})..}}|.|....{({(((({{(((((...(((.(({{,{........})))).)))...))))).|,{(((...)))}.,.}|||...{{{(((({.(((((((((...(((((....)))))...))))))))).,.................{,,.,{((((..(((((.(.((...,.........)).).)))))))))))}.,{((((......))))}(((((...(((....)))...))))))}}}|||}.,,.},}}|||,.......,,,{||..,.}}}....))))))})))))))..))..})))},...