Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0021600

Sequence Length

279 nt

GC Content

0.4803

CCUCUUGUUCUGGACUGAAUGGGGACAAAUGCCCUGUAUUGGAAAGGCUCGCUUGGAUGGCUCAGAGAAGGUUGUCCUUGUAAGCAUGGGAAUAGCAUGGCCGAAUGGCAUCUCCAUCGACUAUGAGGAAAAUAAAUUGUACUGGUGUGAUGCUCGCACAGACAAGAUAGAGAGAAUCGACCUUGAGACUGGAGGGAAUCGCGAGAUGGUGCUGUCAGGAAGCAAUGUGGAUAUGUUUUCAGUUGCAGUCUUUGGGGCUUACAUCUACUGGUCUGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-68.10 kcal/mol

Ensemble Metrics

Free Energy: -74.92

Frequency: 0.0000

Diversity: 95.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((..(((...((((((((((.(....))))))).))))....(((.((..((((((((.......))))))))..)).)))..........(((((.(((.(((.....)))))).)))))............(((.(((.(((((...))))))))))))))..)))))......((((.......))))..(((....)))...)(((((((...(((((.((((......)))))))))(((((...)))))...(((....))))))))))

Thermodynamic Ensemble Prediction

(((((({{(({...{,{{{{((((.{....,)))}}}.}}},....{((.((..((((((((,......))))))))..)}.}}|,{{,......|{{{(,(,.,{||,...,)))}|}.,}}))}}},.......{(((.((,{(((((...)))))))))))),,,.,,.....,},,||||....,},}))},.,||}}}})}.}}.)((((((({..{(({,{((((..,,,.}}}||||,|({,{,.,},)))).,,}}}},},},))))))))