Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0022400

Sequence Length

399 nt

GC Content

0.4185

AUAAGAAACUGUGGUGGGCAGACCAAAACUUAGCCCAGCUAGGAACCUGCAGCAAAAGAGACGGAAGAAACCCCACCAUCCUACGGAAUAAGACUUCUGGGGUAGUUCAUAUGAAAGUCUAUGAUAAAGAAGCACAGCAAGGCAGCAAUUCCUGCCAACUAAACAAUGGUGGAUGCUCUCAACUUUGUUUACCAACAUCUGAAACUACAAGGACUUGUAUGUGUACAGUGGGAUAUUAUCUCCAAAAGAACCGUAUGUCAUGUCAAGGUAUAGAAUCAUUUCUUAUGUACUCUGUUCAUGAAGGAAUCAGGGGAAUACCUCUUGAACCAAGUGACAAAAUGGAUGCUUUGAUGCCUAUAUCAGGAACUUCAUUUGCCGUGGGAAUAGAUUUCCAUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.70 kcal/mol

Ensemble Metrics

Free Energy: -99.24

Frequency: 0.0000

Diversity: 113.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((...(((..(((((((...((((.((((((...)))))).((((...(((......((((.....((((((.....((........)).....)))))).((.((((((.((((((.((........((...))..(((((......)))))..........((((((((............)))))))).............)).)))))).)))))).))..((((((...))).)))......))))......)))..))))..((((....))))...(((.(((((((((...((..(((((((.....))))))).))..))))....)))))))))))).)))))))..)))...))).))((((.(((((((....)))))))))))

Thermodynamic Ensemble Prediction

(((((...(((..(((((((...,,...((((((...))))))...{{........,|.,,{({..,..{{(((({.,,{({.,{{{,......}}})))))}.((.((((((.((((((.{(........{{...}}..(((((......)))))...{{{{{{{,{{({({.....}}..},})))))).,.....,}.......)).)))))).)))))).)).}||||,,....}}})},...,..||||.{{{{{{{{{{{((((({{{,...,|}}}..||||||,|{{{||,,..{|,.{{{{{{{....})))}))),),..))}}}}..}))).},})))).)))))))..)))...))).))((({,(((((({....}))))))))))