Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0022500

Sequence Length

549 nt

GC Content

0.4080

GUCUAUCGAUAGACUAUGUGGAAAACAAGCUUUAUUGGAUCAGUUCAGGGAAUGGAACCAUAAAUAGAUGCAACCUGGAUGGUGGUAAUUUAGAAGUAAUCGAGUCAAUGAAAGAAGAAUUAACAAAAGCUACAGCCCUAACCAUCAUGGAUAAGAAACUGUGGUGGGCAGACCAAAACUUAGCCCAGCUAGGAACCUGCAGCAAAAGAGACGGAAGAAACCCCACCAUCCUACGGAAUAAGACUUCUGGGGUAGUUCAUAUGAAAGUCUAUGAUAAAGAAGCACAGCAAGGCAGCAAUUCCUGCCAACUAAACAAUGGUGGAUGCUCUCAACUUUGUUUACCAACAUCUGAAACUACAAGGACUUGUAUGUGUACAGUGGGAUAUUAUCUCCAAAAGAACCGUAUGUCAUGUCAAGGUAUAGAAUCAUUUCUUAUGUACUCUGUUCAUGAAGGAAUCAGGGGAAUACCUCUUGAACCAAGUGACAAAAUGGAUGCUUUGAUGCCUAUAUCAGGAACUUCAUUUGCCGUGGGAAUAGAUUUCCAUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-119.90 kcal/mol

Ensemble Metrics

Free Energy: -131.77

Frequency: 0.0000

Diversity: 198.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...(((((((((.(((.....))))).))))))))))(.((((..(((((((..((((..(((.((((((((((((((.((((((....(((((....((((.......................(((.(((..((..(((((((((........)))))))))..)).......((((((...))))))...))).))).........((......))((((((((((.(((((......))))))))....(((((........))))).......((...))..(((((......))))).........)))))))..))))...)))))..)))))).))))).........)))..)))))).)))...))))....)))).)))....))))......(((((.((.(((((((((....))))...))))).))..))))).((..(((((((.....))))))).))........(((((((...(((((((....)))))))...)))))))((.(((((((....))))))))).)

Thermodynamic Ensemble Prediction

(((((....|}))}(.((((({,,,|..((((({((((.((.{(((...}}}}.}}.))}...}|}}|.||.,((,(((((((((,.,,,,.....,..||...|,..,,,.....,..}}.......(({.{{{..((..(((((((((........)))))))))..)).......((((((...))))))...}}},}}}.........((......}})))))}}}}..(((({......}))))}}}}.,|}|||{|{,,|||||,|||||.,{..((,.,||,.(((((......)))))...,{{{{{{,{|{{{{,,.,.,}..},})))))),,,.,..{|{..,{{{|{|,,.,))))),)),,.},}||(((,...,}}})),......{{||.{{((((({(({((((({(({...,|}}}..||||||,||{{||,},.{|,,{{{{{{{....})))}))),),..))}})}.,}})),}}}}|}||||,}}.}))))))..,)))))}||||{||||{,....))))))))}})