Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0033900

Sequence Length

384 nt

GC Content

0.4714

UUAAUCCUGGAGAAGCACUACCUCACAUAUGUAAAGCUGGAGAGUUUCGCUGCAAAAACAGACACUGUAUCCAAGCUCGGUGGAAAUGUGAUGGCGACGAUGACUGCCUAGACGGAAGCGAUGAGGAUUCAGUAAACUGCUUCAAUCAUAGCUGUCCUGAUGAUCAGUUUAAAUGCCAGAAUAAUCGCUGCAUCCCCAAGAGAUGGCUUUGUGAUGGAGCUAAUGACUGUGGGAGCAAUGAAGAUGAAUCCAAUCAAACUUGCACAGCCAGAACAUGCCAGGUAGACCAGUUUUCUUGCGGAAAUGGGCGUUGCAUUCCCAGAGCAUGGCUGUGUGACAGGGAAGACGACUGUGGUGACCAGACAGAUGAAAUGGCAUCUUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-94.00 kcal/mol

Ensemble Metrics

Free Energy: -101.65

Frequency: 0.0000

Diversity: 127.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

......((((.....((((((.((((((.(.((.(((((((........(((......)))........))).))))...)).).))))))(((((.....(((((..((...((((((.((((.((..(((....)))..))..)))).))).)))...))..)))))....)))))........(((...(((.(((((((((((..(((..(((.........(((((.(((...(((...((....)).)))..))).))))))))..))).))))((....))...))))))).)))....)))((((..(((((.(.((((....))))..).)))))..)))).)))))).))))(((((((......)))).))).

Thermodynamic Ensemble Prediction

({..{{((({....|(((,,({((((({.{.{,.(((((((.{{{....(((......)))..,},...))),,))),,,}}.}.}}||}}(((((.....(((((..,,...((((((.((((.((..(((....)))..))..)))).))).)))...,,..)))))....)))))..,,..||{|{|({(({{,,,{.|,||,({{{{{.|||,||||,,((.((.(({((({{{((..{{(,......}))..{{{{({{,,{{,......})},}})}...((,,(((((....)))))),)})}))))..})))).}))})))}}}))).,))))).,,,||,|.}}||||.|||,,{,{{{{...}}})))),.))}