Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0041000

Sequence Length

365 nt

GC Content

0.5014

GGUAGAAUGCCAGUGUUUCUCCUCCCACCCAGGCCCAUGUUGCAGAAGUUCUAUUUUAGACAGAUAUGACCAAGAGGACUGGUUCUUCUUCUCCACUCACCCACACUCAUAGUACAGAAGCUCUGCUUCAGGCACAGUGUGCCAAGAAUAUUGGGAGCCUGAUCUCCCUGGUUCAGCCUGUUCAUAGGAUAGAAGUGCCACAAUGAGACAGGCAAGCCAAAAAGACCAGGGUAAGCUACCCACCCUGUAUCCAGUGUGCACCAGAGUGGGAGUGACACUCAGUAAACAGCAAAUCCCUGCCUCCUGCACCAGUGCAGGGUGUGGUGGUUAUGCCUGAGGGGAAAGGUAAGUUAUAAGAUAAGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-107.30 kcal/mol

Ensemble Metrics

Free Energy: -115.33

Frequency: 0.0000

Diversity: 104.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((((.(((((......(((((.....((......((((..((((......)))).))))....)).....))))))))))..)))))(((((((.(((....(((........(((((...))))).(((((...))))).........(((((......)))))(((((..((((((((((.((.((....))))...)))).)))))).))))).......((((...(((((((((((((((((...(.(((((...(((.((((......................))))...))).)))))).)))))))))).)))))))...)))).)))....))).)))..........))))

Thermodynamic Ensemble Prediction

({.((({.{{{,,,.,}}|||((({....{{{{,,(,(({{{{(((,.{{,,.}}||.|,,,,,,,||,...,|||||}}}}},,}})))||{{,,|,|,{....,|,..,}...,|||{{,,,))}}),(((((...)))))........,|||{||}},..|||||(((((..((((((((((.((.{,....},))...))))}}))))).})))}....,,,|||||,.(((((((((((((((((...(.(((((..,({({((((.{,.,............}},..)))).}})),.)))))).)))))))))).))))))).||)))}.))},..,)))..,,..........))))