Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0043900

Sequence Length

357 nt

GC Content

0.3445

GUAGGAUAAUUGCUUGAACUGGGAGGCGGAGGUUGCCGUGAGCCGAGAUUUGUACAACAUUAUACUCCAGCUCUGGGCAAUAUGCAUAUAUAUUUUUUUUCACGUAAUUUCAGUGGCUGAUAUUUUAUUGGUGUUUAUGGCAAUAUGCGGAUCCAAUUCUAGUAAUUUAAUGUUGUAGAAGAAUGAGAAAACCACAGUGGUAGAGUUAAUGUAUAAAUAAUGCAUAUUAGCUAUACAAAGACCAAAUGAGGUUUCAGAUAAGUUUCUGUGGAGAAAUUAGAGGGACAUAUGGUGGUGUAGGCUUACAAAGUAAAGUGAAUUUAUAUUAUAGUAGCUAAUUUGUAUUCUCAUAUUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-73.60 kcal/mol

Ensemble Metrics

Free Energy: -81.75

Frequency: 0.0000

Diversity: 136.37

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((.((((((((((.(((.((((...((.(.(((((((((((((.(((.(((...............))).))).)))((((((....))))))......(((.........)))(((((((...)))))))..)))))))))).).))..)))).))).))))))....)))).)).....((((((..((((...))))..................(((((.(((((((((....(((((......)))))...(((.((((((.(((.....))).)))))).))).((((((((((.((((........)))).)))))))))).))))))))).)))))))))))......

Thermodynamic Ensemble Prediction

,(({.,,,,||||(,((,.(((((.,((,(.(((((((((((((,{{,..{{({...||.,||,,||{,|{|||,|||{,{{{|,....,,........,(((,.,..,,,.)})}((((.{{{{{||||||.{||||||||||,|{||..||},.|||,|}||||....,))),)),,}..{{{{{{..((({...})))..................,||||}|||{|||||,..,|,|||,..,,,))),)}}}.,,.((((((.{{,,,,,,})),)))))}.}}},{(((((((({.((((........)))).)))))))))).))))))}}),))),)))))),.}}.,,